accessionVersion	accession	version	submissionId	isRevocation	submitter	groupName	groupId	submittedAtTimestamp	submittedDate	releasedAtTimestamp	releasedDate	versionStatus	versionComment	pipelineVersion	sampleCollectionDate	geoLocCountry	submittingLab	sixteenSSpecies	mlstSequenceType	mlstSchema	mlstAlleles	amrfinderplusHitCount	amrfinderplusGenes	amrfinderplusClasses	amrfinderplusElementTypes	sixteenSAlignmentLength	sixteenSAlignmentIdentity	contigCount	totalLength	largestContig	n50	n75	l50	l75	ambiguousBasesPer100Kbp	gcPercent	checkmCompleteness	checkmContamination	checkmHeterogeneity	workflowNotes	released_assembly_fasta	immense_quality_summary	immense_quality_qc	sixteen_s_blast	checkm_output	amrfinderplus_output
LOC_000001Y.1	LOC_000001Y	1	SAMN47992565	false	testuser	cEvo	1	1781913926	2026-06-20	1781914211	2026-06-20	LATEST_VERSION	AllTheBacteria Incremental_release_2025-05; ENA run SRR33141801; study PRJNA1184783; ENA collection_date=2023; sampleCollectionDate uses ENA collection_date_start for prototype upload	1	2023-01-01	Chile	SUB15251874	Klebsiella pneumoniae strain DSM 30104 16S ribosomal RNA, partial sequence	25	klebsiella	gapA(2), infB(1), mdh(1), pgi(1), phoE(10), rpoB(4), tonB(13)	42	blaSHV-11;oqxB19;oqxA;kdeA;fieF;fosA;emrD;arsR;arsD;arsA;arsB;arsC;pcoE;pcoS;pcoR;pcoD;pcoC;pcoB;pcoA;silP;silA;silB;silF;silC;silR;silS;silE;ybtP;ybtQ;tet(A);qnrB1;qnrB19;sul2;aph(3'')-Ib;aph(6)-Id;blaTEM-1;dfrA14;blaCTX-M-15;aac(3)-IIe;aac(6')-Ib-cr5;blaOXA-1;catB3	BETA-LACTAM;PHENICOL/QUINOLONE;NITROFURAN/PHENICOL/QUINOLONE/TETRACYCLINE;EFFLUX;FOSFOMYCIN;ARSENIC;COPPER;SILVER;COPPER/SILVER;TETRACYCLINE;QUINOLONE;SULFONAMIDE;AMINOGLYCOSIDE;TRIMETHOPRIM;AMINOGLYCOSIDE/QUINOLONE;PHENICOL	AMR;STRESS;VIRULENCE	1066	99.812	135	5603180	494266	160268	86785	11	21	0.0	57.14	97.93	0.0	0.0	IMMense Loculus workflow: QUAST, MLST, 16S, CheckM, and AMRFinderPlus modules	"[{""fileId"":""36cd60fd-d313-47f2-a1fb-d6ef779015ff"",""name"":""LOC_000001Y_1.fasta"",""url"":""https://api.bacteria.loculus.chaoran.name/backend/files/get/LOC_000001Y/1/released_assembly_fasta/LOC_000001Y_1.fasta""}]"	"[{""fileId"":""4478b797-5454-43fb-9372-631f362770b9"",""name"":""bacteria-batch-0_quality.tsv"",""url"":""https://api.bacteria.loculus.chaoran.name/backend/files/get/LOC_000001Y/1/immense_quality_summary/bacteria-batch-0_quality.tsv""}]"		"[{""fileId"":""8d22bee7-f0ba-4243-9557-6253b9523c2d"",""name"":""LOC_000001Y_1_16S_blast.tab"",""url"":""https://api.bacteria.loculus.chaoran.name/backend/files/get/LOC_000001Y/1/sixteen_s_blast/LOC_000001Y_1_16S_blast.tab""}]"	"[{""fileId"":""59850836-67ed-4677-bf9c-0061430e7f46"",""name"":""LOC_000001Y_1_checkm_output.tsv"",""url"":""https://api.bacteria.loculus.chaoran.name/backend/files/get/LOC_000001Y/1/checkm_output/LOC_000001Y_1_checkm_output.tsv""}]"	"[{""fileId"":""9807e6d7-b331-41a0-ae0a-3422e3b8abed"",""name"":""LOC_000001Y_1_amrfinderplus.tsv"",""url"":""https://api.bacteria.loculus.chaoran.name/backend/files/get/LOC_000001Y/1/amrfinderplus_output/LOC_000001Y_1_amrfinderplus.tsv""}]"