Backend is in debug mode
This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000006N.1

At a glance

Bacterial overview
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Typing

MLST and ribosomal typing
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AMR

AMRFinderPlus profile
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Assembly QC

Assembly QC
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Submission details

Submission ID
SAMEA2072930
Version comment
AllTheBacteria Incremental_release_2025-05; ENA run ERR349780; study PRJEB1800; ENA collection_date=2012; sampleCollectionDate uses ENA collection_date_start for prototype upload
Submitting group
Date submitted
2026-06-20 00:05:26 UTC
Date released
2026-06-20 00:10:11 UTC

Collection Details

Collection date
2012-01-01
Country
Nepal

Submission Details

Submitting lab
Wellcome Sanger Institute;SC

IMMense

Workflow notes
IMMense Loculus workflow: QUAST, MLST, 16S, CheckM, and AMRFinderPlus modules

Files

Assembly FASTA
IMMense merged quality TSV
16S BLAST TSV
CheckM output TSV
AMRFinderPlus TSV