Backend is in debug mode
This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00000AE.1

At a glance

Bacterial overview
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Typing

MLST and ribosomal typing
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AMR

AMRFinderPlus profile
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Assembly QC

Assembly QC
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Submission details

Submission ID
SAMEA118215219
Version comment
AllTheBacteria Incremental_release_2025-05; ENA run ERR14903709; study PRJEB72521; ENA collection_date=2025-03-28T00:00:00; sampleCollectionDate uses ENA collection_date_start for prototype upload
Submitting group
Date submitted
2026-10-01 10:46:33 UTC
Date released
2026-10-01 11:52:51 UTC

Collection Details

Collection date
2025-03-28
Country
Slovakia

Submission Details

Submitting lab
Comenius University Science Park;Laboratory of Genomics and Bioinformatics;Comenius University Science Park Public Health Authority of the Slovak Republic

IMMense

Workflow notes
IMMense Loculus workflow: QUAST, MLST, 16S, CheckM, and AMRFinderPlus modules

Files

Assembly FASTA
IMMense merged quality TSV
16S BLAST TSV
CheckM output TSV
AMRFinderPlus TSV